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# Created by: Johann Visagie <wjv@FreeBSD.org>
# $FreeBSD$
PORTNAME= t_coffee
PORTVERSION= 9.03
DISTVERSIONSUFFIX= .r1318
PORTREVISION= 2
CATEGORIES= biology
MASTER_SITES= http://www.tcoffee.org/Packages/Stable/%SUBDIR%/
MASTER_SITE_SUBDIR= Version_${PORTVERSION}${DISTVERSIONSUFFIX}
DISTNAME= T-COFFEE_distribution_Version_${PORTVERSION}${DISTVERSIONSUFFIX}
MAINTAINER= ports@FreeBSD.org
COMMENT= A multiple DNA or protein sequence alignment package
LICENSE= GPLv2
RUN_DEPENDS= clustalw:${PORTSDIR}/biology/clustalw
OPTIONS_DEFINE= EXAMPLES
BUILD_WRKSRC= ${WRKSRC}/t_coffee_source
USES= fortran
CFLAGS+= -Wno-return-type
MAKE_ENV= FCC="${FC} ${FFLAGS}"
MAKEFILE= makefile
PORTEXAMPLES= *
PLIST_FILES= bin/TMalign bin/t_coffee
do-install:
(cd ${BUILD_WRKSRC} \
&& ${INSTALL_PROGRAM} TMalign t_coffee ${STAGEDIR}${PREFIX}/bin)
${MKDIR} ${STAGEDIR}${EXAMPLESDIR}
(cd ${WRKSRC}/example && ${COPYTREE_SHARE} . ${STAGEDIR}${EXAMPLESDIR})
.include <bsd.port.mk>
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