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# Created by: Jason Bacon <bacon4000@gmail.com>
# $FreeBSD$
PORTNAME= FastTree
PORTVERSION= 2.1.8
PORTREVISION= 2
CATEGORIES= biology
MASTER_SITES= http://www.microbesonline.org/fasttree/
EXTRACT_SUFX= .c
MAINTAINER= bacon4000@gmail.com
COMMENT= Approximately-maximum-likelihood phylogenetic trees from alignments
# LICENSE= unspecified open source
USES= compiler:openmp
CFLAGS+= -DOPENMP -fopenmp -O3 -finline-functions -funroll-loops
LDFLAGS+= -lm
PLIST_FILES= bin/FastTree
do-extract:
${MKDIR} ${WRKSRC}
${CP} ${DISTDIR}/${DISTFILES} ${WRKSRC}
do-build:
cd ${WRKSRC} && ${CC} ${CFLAGS} -o FastTree ${DISTFILES} ${LDFLAGS}
do-install:
${MKDIR} ${STAGEDIR}${PREFIX}/bin
${INSTALL_PROGRAM} ${WRKSRC}/FastTree ${STAGEDIR}${PREFIX}/bin
.include <bsd.port.mk>
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