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* python-nexus is a generic nexus (phylogenetics) file format(.nex, .trees)wen2009-12-291-0/+1
* pyfasta is a python module for fast, memory-efficient, pythonicwen2009-11-181-0/+1
* Velvet is a de novo genomic assembler specially designed for short readamdmi32009-11-071-0/+1
* Bio::SCF module allows you to read and update (in a restrictedmiwi2009-08-281-0/+1
* Io_lib is a library of file reading and writing code to provide amiwi2009-08-281-0/+1
* Bio::NEXUS package provides an object-oriented, Perl-basedmiwi2009-08-221-0/+1
* PhyML is a software that estimates maximum likelihood phylogenies fromamdmi32009-07-211-0/+1
* p5-Bio-MAGETAB contains the core MAGE-TAB Utilities Perl modules. Thismiwi2009-07-011-0/+1
* PyCogent is a software library for genomic biology. It is a fully integratedmiwi2009-06-221-0/+1
* Add the biology/crux port.jasone2009-06-081-0/+1
* 2009-05-31 biology/p5-bioperl-devel: no longer under developmentmiwi2009-06-051-2/+0
* LibSBML is an open-source programming library to help you read, write,miwi2009-05-281-0/+1
* Bio::Glite is an interface to G-language Genome Analysis Environmentmiwi2009-04-021-0/+1
* p5-Bio-Graphics is a simple GD-based renderer (diagram drawer)miwi2009-03-101-0/+1
* - Delete biology/nab port after being marked DEPRECATED for three monthspav2008-07-241-1/+0
* SSAHA is a software tool for very fast matching and alignment of DNAlippe2008-06-211-0/+1
* New port: biology/consed viewing and editing workbench for sequenceedwin2008-05-241-0/+1
* New port: biology/consed viewing and editing workbench for sequenceedwin2008-05-241-0/+1
* New port: biology/consed viewing and editing workbench for sequenceedwin2008-05-241-0/+1
* New port: biology/consed viewing and editing workbench for sequenceedwin2008-05-241-0/+1
* NJplot is a tree drawing program able to draw any phylogenetic tree expressedpav2008-05-141-0/+1
* MUSCLE is multiple alignment software for protein and nucleotide sequences.pav2008-05-141-0/+1
* MAPMAKER/EXP is a linkage analysis package designed to help construct primaryrafan2008-04-061-0/+1
* MrBayes is a program for the Bayesian estimation of phylogeny.miwi2007-12-151-0/+1
* MUMmer is a modular system for the rapid whole genome alignment of finishedmiwi2007-12-141-0/+1
* - Sort category Makefilessat2007-10-051-2/+2
* Remove expired leaf port:vd2007-01-251-1/+0
* The BioCocoa framework provides developers with the opportunity to adddinoex2006-12-301-0/+1
* Adun is a new extendible molecular simulation program that alsodinoex2006-11-091-0/+1
* Add gmap 2006.04.21, a Genomic Mapping and Alignment Program for mRNAclsung2006-09-291-0/+1
* Folding@Home is a distributed computing project -- people from through out thepav2006-08-281-0/+1
* SIMAP (Similarity Matrix of Proteins) is a public database of pre-calculatedpav2006-06-191-0/+1
* Adding port biology/p5-Bio-Phylo, Phylogenetic analysis using perl.aaron2006-05-131-0/+1
* Add protomol 2.0.3, OO, component based, framework for molecularehaupt2006-05-051-0/+1
* Bioperl-run contain modules that provides a PERL interface to variousgarga2006-05-021-0/+1
* Bioperl-run contain modules that provides a PERL interface to variousgarga2006-05-021-0/+1
* Add lagan 1.2, efficient tools for large-scale multiple alignments ofgarga2006-03-161-0/+1
* Add mafft 5.734, multiple sequence alignments based on fast Fouriergarga2006-03-151-0/+1
* Add dotter 20021204 # last modified date in FTP server, a viewer forgarga2006-03-151-0/+1
* Add blat 33, a fast tool for local sequence similarity searches.garga2006-03-151-0/+1
* Add belvu 2.29, a viewer for multiple sequence alignments.garga2006-03-151-0/+1
* Jalview is a multiple alignment editor written in Java. It is used widely in ahq2006-02-131-0/+1
* - Resurrect, update to version 1.5 (literally 1.50 since I wanted to avoiddanfe2006-01-191-0/+1
* - Remove expired portspav2006-01-141-3/+0
* - Re-add p5-bioperl-devel, development version of biology/p5-bioperlbarner2005-12-021-0/+1
* Remove expired portskris2005-11-051-1/+0
* Add p5-Bio-ASN1-EntrezGene, a Regular expression-based Perl Parser forehaupt2005-10-151-0/+1
* Add p5-Bio-Das 1.02, client-side library for Distributed Genomegarga2005-09-011-0/+1
* - biology/act is redundant after biology/artemis updatesem2005-03-121-1/+0
* Add finchtv 1.3.0, a chromatogram trace viewer.thierry2005-03-111-0/+1
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