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-rw-r--r--biology/hmmer/Makefile16
-rw-r--r--biology/hmmer/distinfo2
-rw-r--r--biology/hmmer/pkg-plist6
3 files changed, 16 insertions, 8 deletions
diff --git a/biology/hmmer/Makefile b/biology/hmmer/Makefile
index 1fec7ac..d30140a 100644
--- a/biology/hmmer/Makefile
+++ b/biology/hmmer/Makefile
@@ -3,27 +3,29 @@
# Date created: June 29 1998
# Whom: barnhart@genetics.wustl.edu
#
-# $Id: Makefile,v 1.2 1998/12/09 22:35:04 billf Exp $
+# $Id: Makefile,v 1.3 1999/01/02 00:12:17 asami Exp $
#
-DISTNAME= hmmer-2.0
+DISTNAME= hmmer-2.1.1
CATEGORIES= biology
-MASTER_SITES= ftp://ftp.genetics.wustl.edu/pub/eddy/hmmer/oldversions/2.0/
+MASTER_SITES= ftp://ftp.genetics.wustl.edu/pub/eddy/hmmer/
EXTRACT_SUFX= .tar.Z
MAINTAINER= barnhart@genetics.wustl.edu
-USE_PERL5= yes
-MAN1= hmmalign.1 hmmbuild.1 hmmcalibrate.1 hmmconvert.1 hmmemit.1 hmmer.1 hmmpfam.1 hmmsearch.1
+GNU_CONFIGURE= yes
-WRKSRC= ${WRKDIR}/build/${DISTNAME}
+USE_PERL5= yes
+MAN1= hmmalign.1 hmmbuild.1 hmmcalibrate.1 hmmconvert.1 hmmemit.1 \
+ hmmer.1 hmmpfam.1 hmmsearch.1 hmmfetch.1 hmmindex.1 alistat.1 \
+ getseq.1 seqstat.1 sreformat.1
post-build:
@ strip ${WRKSRC}/binaries/*
@ make test
test:
- @(cd ${WRKSRC}; make test)
+ @(cd ${WRKSRC}; make check)
post-install:
.if !defined(NOPORTDOCS)
diff --git a/biology/hmmer/distinfo b/biology/hmmer/distinfo
index c9d8219..6dbe81b 100644
--- a/biology/hmmer/distinfo
+++ b/biology/hmmer/distinfo
@@ -1 +1 @@
-MD5 (hmmer-2.0.tar.Z) = 7e993a3883046840f0672ea004bc268b
+MD5 (hmmer-2.1.1.tar.Z) = 0f98910a3507b4d52fbe82adc6fa89b5
diff --git a/biology/hmmer/pkg-plist b/biology/hmmer/pkg-plist
index dc16278..07e78f3 100644
--- a/biology/hmmer/pkg-plist
+++ b/biology/hmmer/pkg-plist
@@ -1,9 +1,15 @@
+bin/alistat
+bin/getseq
bin/hmmalign
bin/hmmbuild
bin/hmmcalibrate
bin/hmmconvert
bin/hmmemit
+bin/hmmfetch
+bin/hmmindex
bin/hmmpfam
bin/hmmsearch
+bin/seqstat
+bin/sreformat
share/doc/hmmer/Userguide.ps
@dirrm share/doc/hmmer
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