Clear moonlight beckons.

Requiem mors pacem pkg-comment,
And be calm ports tree.

E Nomini Patri, E Fili, E Spiritu Sancti.

28 files changed, 14 insertions, 14 deletions

diff --git a/biology/coalesce/Makefile b/biology/coalesce/Makefile
index 7dd0ff4..9ab00a0 100644
--- a/biology/coalesce/Makefile
+++ b/biology/coalesce/Makefile
@@ -13,6 +13,7 @@ DISTNAME=	${PORTNAME}
 EXTRACT_SUFX=	.tar.Z
 
 MAINTAINER=	wjv@FreeBSD.org
+COMMENT=	A program to fit population models
 
 NO_WRKSUBDIR=	yes
 ALL_TARGET=	${PORTNAME}
diff --git a/biology/coalesce/pkg-comment b/biology/coalesce/pkg-comment
deleted file mode 100644
index 8e9f159..0000000
--- a/biology/coalesce/pkg-comment
+++ /dev/null
@@ -1 +0,0 @@
-A program to fit population models
diff --git a/biology/emboss/Makefile b/biology/emboss/Makefile
index 1fece8d..c847e0a 100644
--- a/biology/emboss/Makefile
+++ b/biology/emboss/Makefile
@@ -16,6 +16,7 @@ DIST_SUBDIR=	${PORTNAME}
 EXTRACT_ONLY=	${PORTNAME:U}-${PORTVERSION}${EXTRACT_SUFX}
 
 MAINTAINER=	wjv@FreeBSD.org
+COMMENT=	A collection of open source tools for genetic sequence analysis
 
 LIB_DEPENDS=	gd.2:${PORTSDIR}/graphics/gd
 
diff --git a/biology/emboss/pkg-comment b/biology/emboss/pkg-comment
deleted file mode 100644
index 5b05a78..0000000
--- a/biology/emboss/pkg-comment
+++ /dev/null
@@ -1 +0,0 @@
-A collection of open source tools for genetic sequence analysis
diff --git a/biology/fasta/Makefile b/biology/fasta/Makefile
index cc5e408..839caa2 100644
--- a/biology/fasta/Makefile
+++ b/biology/fasta/Makefile
@@ -13,6 +13,7 @@ DISTNAME=	fasta${PORTVERSION:S/.//g}
 EXTRACT_SUFX=	.shar.Z
 
 MAINTAINER=	wjv@FreeBSD.org
+COMMENT=	A collection of programs for searching DNA and protein databases
 
 NO_CDROM=	May not be sold or incorporated into a commercial product
 WRKSRC=		${WRKDIR}/fasta
diff --git a/biology/fasta/pkg-comment b/biology/fasta/pkg-comment
deleted file mode 100644
index b4e576a..0000000
--- a/biology/fasta/pkg-comment
+++ /dev/null
@@ -1 +0,0 @@
-A collection of programs for searching DNA and protein databases
diff --git a/biology/fasta3/Makefile b/biology/fasta3/Makefile
index 3c0523f..25dcad2 100644
--- a/biology/fasta3/Makefile
+++ b/biology/fasta3/Makefile
@@ -13,6 +13,7 @@ DISTNAME=	fasta${PORTVERSION:S/.//g}
 EXTRACT_SUFX=	.shar.Z
 
 MAINTAINER=	wjv@FreeBSD.org
+COMMENT=	A collection of programs for searching DNA and protein databases, v3
 
 NO_CDROM=	May not be sold or incorporated into a commercial product
 WRKSRC=		${WRKDIR}/fasta3
diff --git a/biology/fasta3/pkg-comment b/biology/fasta3/pkg-comment
deleted file mode 100644
index 2009217..0000000
--- a/biology/fasta3/pkg-comment
+++ /dev/null
@@ -1 +0,0 @@
-A collection of programs for searching DNA and protein databases, v3
diff --git a/biology/fluctuate/Makefile b/biology/fluctuate/Makefile
index 551298c..abc0950 100644
--- a/biology/fluctuate/Makefile
+++ b/biology/fluctuate/Makefile
@@ -13,6 +13,7 @@ DISTNAME=	${PORTNAME}
 EXTRACT_SUFX=	.tar.Z
 
 MAINTAINER=	wjv@FreeBSD.org
+COMMENT=	A program to fit population models
 
 NO_WRKSUBDIR=	yes
 ALL_TARGET=	${PORTNAME}
diff --git a/biology/fluctuate/pkg-comment b/biology/fluctuate/pkg-comment
deleted file mode 100644
index 8e9f159..0000000
--- a/biology/fluctuate/pkg-comment
+++ /dev/null
@@ -1 +0,0 @@
-A program to fit population models
diff --git a/biology/hmmer/Makefile b/biology/hmmer/Makefile
index 92658fd..3319317 100644
--- a/biology/hmmer/Makefile
+++ b/biology/hmmer/Makefile
@@ -13,6 +13,7 @@ MASTER_SITES=	ftp://ftp.genetics.wustl.edu/pub/eddy/hmmer/${VERSIONSTRING}/
 DISTNAME=	${PORTNAME}-${VERSIONSTRING}
 
 MAINTAINER=	wjv@FreeBSD.org
+COMMENT=	Profile hidden Markov models for biological sequence analysis
 
 GNU_CONFIGURE=	yes
 USE_PERL5=	yes
diff --git a/biology/hmmer/pkg-comment b/biology/hmmer/pkg-comment
deleted file mode 100644
index fe4433a..0000000
--- a/biology/hmmer/pkg-comment
+++ /dev/null
@@ -1 +0,0 @@
-Profile hidden Markov models for biological sequence analysis
diff --git a/biology/lamarc/Makefile b/biology/lamarc/Makefile
index 38dc0c5..9fa785a 100644
--- a/biology/lamarc/Makefile
+++ b/biology/lamarc/Makefile
@@ -13,6 +13,7 @@ DISTFILES=	# none
 EXTRACT_ONLY=	# empty
 
 MAINTAINER=	wjv@FreeBSD.org
+COMMENT=	A package of programs for computing population parameters
 
 RUN_DEPENDS=	coalesce:${PORTSDIR}/biology/coalesce \
 		fluctuate:${PORTSDIR}/biology/fluctuate \
diff --git a/biology/lamarc/pkg-comment b/biology/lamarc/pkg-comment
deleted file mode 100644
index 65c98d7..0000000
--- a/biology/lamarc/pkg-comment
+++ /dev/null
@@ -1 +0,0 @@
-A package of programs for computing population parameters
diff --git a/biology/migrate/Makefile b/biology/migrate/Makefile
index e5741f0..3af3e84 100644
--- a/biology/migrate/Makefile
+++ b/biology/migrate/Makefile
@@ -12,6 +12,7 @@ MASTER_SITES=	ftp://evolution.genetics.washington.edu/pub/lamarc/migrate/
 DISTNAME=	${PORTNAME}-${PORTVERSION}.src
 
 MAINTAINER=	wjv@FreeBSD.org
+COMMENT=	A program to estimate population sizes and migration rates
 
 WRKSRC=		${WRKDIR}/${PORTNAME}-${PORTVERSION}
 CONFIGURE_WRKSRC=	${WRKSRC}/src
diff --git a/biology/migrate/pkg-comment b/biology/migrate/pkg-comment
deleted file mode 100644
index 1cf2d7f..0000000
--- a/biology/migrate/pkg-comment
+++ /dev/null
@@ -1 +0,0 @@
-A program to estimate population sizes and migration rates
diff --git a/biology/p5-bioperl-devel/Makefile b/biology/p5-bioperl-devel/Makefile
index dfedb42..ca7a2c0 100644
--- a/biology/p5-bioperl-devel/Makefile
+++ b/biology/p5-bioperl-devel/Makefile
@@ -15,6 +15,7 @@ PKGNAMESUFFIX=	-devel
 DISTFILES=	${DISTNAME}${EXTRACT_SUFX}
 
 MAINTAINER=	wjv@FreeBSD.org
+COMMENT=	A collection of Perl modules for bioinformatics (developer's release)
 
 # These are all run-time dependencies, but listing them in ${BUILD_DEPENDS}
 # prevents a flood of build-time warnings.
diff --git a/biology/p5-bioperl-devel/pkg-comment b/biology/p5-bioperl-devel/pkg-comment
deleted file mode 100644
index bb7e0ab..0000000
--- a/biology/p5-bioperl-devel/pkg-comment
+++ /dev/null
@@ -1 +0,0 @@
-A collection of Perl modules for bioinformatics (developer's release)
diff --git a/biology/p5-bioperl/Makefile b/biology/p5-bioperl/Makefile
index 669216b..28ae575 100644
--- a/biology/p5-bioperl/Makefile
+++ b/biology/p5-bioperl/Makefile
@@ -16,6 +16,7 @@ PKGNAMEPREFIX=	p5-
 DISTFILES=	${DISTNAME}${EXTRACT_SUFX}
 
 MAINTAINER=	wjv@FreeBSD.org
+COMMENT=	A collection of Perl modules for bioinformatics
 
 # These are all run-time dependencies, but listing them in ${BUILD_DEPENDS}
 # prevents a flood of build-time warnings.
diff --git a/biology/p5-bioperl/pkg-comment b/biology/p5-bioperl/pkg-comment
deleted file mode 100644
index 6603d94..0000000
--- a/biology/p5-bioperl/pkg-comment
+++ /dev/null
@@ -1 +0,0 @@
-A collection of Perl modules for bioinformatics
diff --git a/biology/py-biopython/Makefile b/biology/py-biopython/Makefile
index baddf20..2c0ba22 100644
--- a/biology/py-biopython/Makefile
+++ b/biology/py-biopython/Makefile
@@ -14,6 +14,7 @@ DISTNAME=	${PORTNAME}-${PORTVERSION:S/.a/a/}
 DISTFILES=	${DISTNAME}${EXTRACT_SUFX}
 
 MAINTAINER=	wjv@FreeBSD.org
+COMMENT=	A collection of Python modules for bioinformatics
 
 BUILD_DEPENDS=	${PYDISTUTILS}
 RUN_DEPENDS=	${PYNUMERIC} \
diff --git a/biology/py-biopython/pkg-comment b/biology/py-biopython/pkg-comment
deleted file mode 100644
index 0310e64..0000000
--- a/biology/py-biopython/pkg-comment
+++ /dev/null
@@ -1 +0,0 @@
-A collection of Python modules for bioinformatics
diff --git a/biology/pymol/Makefile b/biology/pymol/Makefile
index 4591e45..267c761 100644
--- a/biology/pymol/Makefile
+++ b/biology/pymol/Makefile
@@ -14,6 +14,7 @@ DISTNAME=	pymol-${PORTVERSION:S/./_/}-src
 EXTRACT_SUFX=	.tgz
 
 MAINTAINER=	maho@FreeBSD.org
+COMMENT=	Free and Open-Source molecular modeling system
 
 BUILD_DEPENDS=	${PYNUMERIC}
 RUN_DEPENDS=	${PYNUMERIC} \
diff --git a/biology/pymol/pkg-comment b/biology/pymol/pkg-comment
deleted file mode 100644
index 6c056b0..0000000
--- a/biology/pymol/pkg-comment
+++ /dev/null
@@ -1 +0,0 @@
-Free and Open-Source molecular modeling system
diff --git a/biology/recombine/Makefile b/biology/recombine/Makefile
index 51e89b1..bf13cb6 100644
--- a/biology/recombine/Makefile
+++ b/biology/recombine/Makefile
@@ -12,6 +12,7 @@ MASTER_SITES=	ftp://evolution.genetics.washington.edu/pub/lamarc/recombine/
 DISTNAME=	${PORTNAME}${PORTVERSION}
 
 MAINTAINER=	wjv@FreeBSD.org
+COMMENT=	A program to fit population models across sites
 
 NO_WRKSUBDIR=	yes
 ALL_TARGET=	${PORTNAME}
diff --git a/biology/recombine/pkg-comment b/biology/recombine/pkg-comment
deleted file mode 100644
index 00509aa..0000000
--- a/biology/recombine/pkg-comment
+++ /dev/null
@@ -1 +0,0 @@
-A program to fit population models across sites
diff --git a/biology/t_coffee/Makefile b/biology/t_coffee/Makefile
index f1d3ddb..7a70657 100644
--- a/biology/t_coffee/Makefile
+++ b/biology/t_coffee/Makefile
@@ -12,6 +12,7 @@ MASTER_SITES=	http://igs-server.cnrs-mrs.fr/~cnotred/Packages/
 DISTNAME=	T-COFFEE_distribution
 
 MAINTAINER=	wjv@FreeBSD.org
+COMMENT=	A multiple DNA or protein sequence alignment package
 
 BUILD_DEPENDS=	clustalw:${PORTSDIR}/biology/clustalw
 RUN_DEPENDS=	${BUILD_DEPENDS}
diff --git a/biology/t_coffee/pkg-comment b/biology/t_coffee/pkg-comment
deleted file mode 100644
index c0f726d..0000000
--- a/biology/t_coffee/pkg-comment
+++ /dev/null
@@ -1 +0,0 @@
-A multiple DNA or protein sequence alignment package