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# Created by: camson@bilateral.com.au
# $FreeBSD$
PORTNAME= artemis
PORTVERSION= 9
PORTREVISION= 2
CATEGORIES= biology java
MASTER_SITES= http://www.sanger.ac.uk/Software/Artemis/v${PORTVERSION}/ \
ftp://ftp.sanger.ac.uk/pub/pathogens/software/artemis/v${PORTVERSION}/
DISTNAME= artemis_compiled_v${PORTVERSION}
MAINTAINER= ports@FreeBSD.org
COMMENT= DNA sequence viewer and annotation tool
WRKSRC= ${WRKDIR}/${PORTNAME}
USES= shebangfix
SHEBANG_FILES= etc/go_associations.pl
perl_OLD_CMD= /usr/local/bin/perl5.6.1
USE_JAVA= yes
JAVA_VERSION= 1.6+
NO_ARCH= yes
NO_BUILD= yes
PLIST_SUB= PORTVERSION="${PORTVERSION}"
post-extract:
@${FIND} ${WRKSRC} -type d -name CVS -exec ${RM} -r {} +
do-install:
@${MKDIR} ${STAGEDIR}${PREFIX}/${PORTNAME}-${PORTVERSION}
@${TAR} -C ${WRKSRC} -cf- . | ${TAR} -C ${STAGEDIR}${PREFIX}/${PORTNAME}-${PORTVERSION} -xpf-
@${LN} -s ../${PORTNAME}-${PORTVERSION}/art ${STAGEDIR}${PREFIX}/bin/art
@${LN} -s ../${PORTNAME}-${PORTVERSION}/act ${STAGEDIR}${PREFIX}/bin/act
.include <bsd.port.mk>
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