--- bwt_lite.c.orig 2014-05-19 13:11:41 UTC +++ bwt_lite.c @@ -48,7 +48,7 @@ bwtl_t *bwtl_seq2bwtl(int len, const uin } { // generate cnt_table for (i = 0; i != 256; ++i) { - u_int32_t j, x = 0; + uint32_t j, x = 0; for (j = 0; j != 4; ++j) x |= (((i&3) == j) + ((i>>2&3) == j) + ((i>>4&3) == j) + (i>>6 == j)) << (j<<3); b->cnt_table[i] = x;