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* Update to version 1.82wjv2001-07-032-3/+2
| | | | | PR: 28609 Submitted by: David A. Bader <dbader@eece.unm.edu> (MAINTAINER)
* Use $FILESDIR rather than hard-coded path.wjv2001-06-291-1/+1
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* Updating my email address in my remaining ports.wjv2001-06-273-3/+3
| | | | Prompted by: vanilla
* Embarrassingly long overdue update to 0.7.0, including optional support forwjv2001-06-263-66/+300
| | | | GUI (Tk) and CORBA extensions.
* Update to version 2001.04.03; add installation of some documentation.wjv2001-06-205-30/+86
| | | | Approved by: MAINTAINER
* Update to 1.00.a1; change MAINTAINER to my new address.wjv2001-06-156-124/+691
| | | | | | | | Many changes to port, including addition of CORBA functionality. PR: 27957 Submitted by: Johann Visagie <johann@egenetics.com> Reviewed by: nbm
* Update to 1.13.3; remove bogus file.wjv2001-06-154-71/+9
| | | | | PR: 28119 Reviewed by: nbm
* - Update to version 1.2.6akevlo2001-06-124-8/+9
| | | | | | | - Fix WWW: line PR: 28038 Submitted by: Ports Fury
* Distfile was moved and renamed.markp2001-06-112-3/+3
| | | | | PR: 28004 Submitted by: Jeff Palmer <scorpio@drkshdw.org>
* Use proper POSIX syntax for `chown'.obrien2001-06-011-1/+1
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* Update to version 1.13.1kevlo2001-05-305-42/+240
| | | | | PR: 27768 Submitted by: MAINTAINER
* math/numpy was renamed to math/py-numeric.sobomax2001-05-291-1/+1
| | | | | PR: 27594 Submitted by: Chang, Hye-Shik <perky@python.or.kr>
* upgrade to 4.3.2ijliao2001-05-2714-458/+389
| | | | | PR: 27273 Submitted by: maintainer
* Update the EMBOSS suite (biology/emboss) to version 1.12.0jeh2001-05-073-138/+25
| | | | | PR: 27179 Submitted by: Johann Visagie <johann@egenetics.com> MAINTAINER
* Updata biology/fasta3 to version 33.t08.d4jeh2001-05-073-8/+8
| | | | | PR: 27176 Submitted by: Johann Visagie <johann@egenetics.com> MAINTAINER
* Update distfile checksum (PORTREVISION bumped)olgeni2001-04-205-37/+14
| | | | | | | | | | also: * Change maintainer's email address. * Remove support for older FreeBSD versions. PR: 26710 Submitted by: Glenn Johnson <gjohnson@srrc.ars.usda.gov>
* activate IGNOREFILES.sf2001-04-131-0/+3
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* Ignore checksum. The distfile changes day by day.sf2001-04-131-1/+1
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* This port require X libraries to build/run.steve2001-04-111-0/+1
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* Overhaul QT/KDE support:will2001-04-031-2/+1
| | | | | | | | | | | | | | | | | | - bsd.port.mk update to use bsd.kde.mk for USE_{QT,KDE}* - Cleanup corresponding ports for bsd.kde.mk update. - Fix bsd.kde.mk: use correct kdelibs dependency, put qt at the bottom, introduce QT_NONSTANDARD variable for nonstandard configure setup. - Update KDE2 to 2.1.1. Two patches included in x11/kdelibs2 to fix the proxy authentication that was broken for 2.1.1. Remove old patches. - Potentially fix kdelibs build for alpha. - Fix qt-designer 2.3.0 build. - Ruby stuff left alone since it looks like black magic to me. Should still work w/ compat shims for older USE_QT[,2] style. Some others were also left alone for the same reason. Reviewed by: portmgr, ports (bsd.kde.mk+bsd.port.mk) Submitted by: David Faure <faure@kde.org> (proxy auth patches) Alex Zepeda <garbanzo@kde.org> (old patches removal)
* update to 3.03mharo2001-04-024-27/+5
| | | | | PR: 26094 Submitted by: maintainer
* updated port biology/phylip from vers 3.5 to 3.6mharo2001-04-025-94/+110
| | | | | PR: 26146 Submitted by: "David A. Bader" <dbader@eece.unm.edu>
* - Update MASTER_SITES and WWW: linekevlo2001-03-314-32/+21
| | | | | | | | | - Support CC/CFLAGS properly - Support install macros - Add PORTDOCS to pkg-plist PR: 26228 Submitted by: Ports Fury
* Update to 33.t08.d3.sobomax2001-03-223-4/+3
| | | | Submitted by: maintainer
* - Upgrade to version 1.70kevlo2001-03-135-18/+41
| | | | | | | - Update WWW PR: 25772 Submitted by: maintainer
* Upgrade to 0.4.kuriyama2001-03-134-12/+12
| | | | | Submitted by: Ryo MIYAMOTO <rmiya@cc.hirosaki-u.ac.jp> (maintainer) PR: ports/25741
* o update to 2.7.2.sf2001-03-122-5/+5
| | | | | | | o pass maintainership to ports@. PR: 25685 Submitted by: maintainer
* pass maintainership to ports@.sf2001-03-121-1/+1
| | | | | PR: 25685 Submitted by: maintainer
* Update to lastest versionkevlo2001-03-122-2/+3
| | | | | PR: 25726 Submitted by: maintainer
* Update the EMBOSS suite to v1.11.0nbm2001-03-123-7/+12
| | | | | PR: 25728 Submitted by: johann@egenetics.com
* - A small bugfix lead to a rerelease without a version number change.nbm2001-03-122-1/+2
| | | | | | | - Bumped PORTREVISION. Submitted by: Johann Visagie <johann@egenetics.com> PR: 25725
* Update to 0.85.trevor2001-03-122-2/+2
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* Force -O0 on the Alpha.trevor2001-03-121-1/+7
| | | | Submitted by: steve
* fix WWW:sf2001-03-091-1/+1
| | | | | PR: 25625 Submitted by: maintainer
* update to 33.t08.d2.sf2001-03-082-2/+2
| | | | | PR: 25609 Submitted by: maintainer
* gd.2, not gd.1ijliao2001-03-051-1/+1
| | | | Submitted by: bento
* Change MASTER_SITE and FTP/WWW lines: caos.kun.nl is cmbi.kun.nl now.roam2001-03-042-3/+3
| | | | | PR: 25422 Submitted by: Marc van Woerkom <marc.vanwoerkom@science-factory.com>
* Remove do-configure section, use PERL_CONFIGURE now.vanilla2001-03-011-1/+0
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* Update to version 1.10.1kevlo2001-02-283-8/+7
| | | | | PR: 25449 Submitted by: maintainer
* reimport biology/genpakijliao2001-02-288-0/+164
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* module name conflict with print/gp, so remove it and I'll reimport it againijliao2001-02-288-163/+0
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* add gpijliao2001-02-278-0/+163
| | | | GP is a set of small utilities to manipulate DNA sequences
* Update to version 1.10.0kevlo2001-02-205-24/+51
| | | | | PR: 25228 Submitted by: MAINTAINER
* The author (at my request) has gone back to a more FreeBSD-friendlytrevor2001-02-192-2/+1
| | | | way of naming the distfile. Change the port accordingly.
* Update to 0.84.trevor2001-02-193-15/+14
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* Update to version 2001-02-06jeh2001-02-192-2/+2
| | | | | PR: 25200 Submitted by: Johann Visagie <johann@egenetics.com>
* Chase graphics/gd's shlib version bump.knu2001-02-121-1/+2
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* - New port: biology/fasta3, which comprises the FASTA3 suite of DNA andjeh2001-02-119-0/+204
| | | | | | | | | protein sequence search programs - FASTA3 updates only some of the elements of FASTA2, which is why I have submitted ports of both versions (as biology/fasta and biology/fasta3) PR: 24716 Submitted by: Johann Visagie <johann@egenetics.com>
* New port: biology/fasta, the FASTA2 suite of DNA and protein sequencejeh2001-02-118-0/+151
| | | | | | | search tools PR: 24715 Submitted by: Johann Visagie <johann@egenetics.com>
* add gaussian98, an ab-initio molecular orbital calculation program.sf2001-02-1012-0/+822
| | | | | PR: 23577 Submitted by: NAKATA, Maho <chat95@mbox.kyoto-inet.or.jp>
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