Commit message (Collapse) | Author | Age | Files | Lines | |
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* | Delete biology/gaussian98. Maintain is too hard and | maho | 2003-01-31 | 11 | -820/+0 |
| | | | | gray in license | ||||
* | Update to 0.4.0. | knu | 2003-01-29 | 3 | -14/+26 |
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* | add '-f' argument to rm so that the script always work even if a | lioux | 2003-01-23 | 1 | -1/+1 |
| | | | | | | file is not there Submitted by: Frerich Raabe <frerich.raabe@gmx.de> | ||||
* | New Port: biology/act | edwin | 2003-01-16 | 6 | -0/+1031 |
| | | | | | PR: ports/35753 Submitted by: Camson Huynh <chuynh@biolateral.com.au> | ||||
* | Add missing file | kris | 2003-01-14 | 1 | -0/+1 |
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* | Add some missing files | kris | 2003-01-14 | 1 | -0/+4 |
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* | Update to 3.8 | arved | 2003-01-08 | 3 | -22/+6 |
| | | | | Approved by: rmiya@cc.hirosaki-u.ac.jp (maintainer) | ||||
* | update biology/babel to properly output mm3 files. | edwin | 2003-01-03 | 2 | -1/+93 |
| | | | | | PR: ports/42425 Submitted by: Glenn Johnson <glennpj@charter.net> | ||||
* | upgrade to 3.7 | ijliao | 2003-01-02 | 5 | -193/+255 |
| | | | | | PR: 44957 Submitted by: maintainer | ||||
* | add missing include | ijliao | 2002-12-29 | 1 | -0/+10 |
| | | | | | PR: 46584 Submitted by: Ports Fury | ||||
* | fix build on -current | ijliao | 2002-12-22 | 5 | -0/+53 |
| | | | | | PR: 46459 Submitted by: Ports Fury | ||||
* | Fix typo: distribfold.org -> distributedfolding.org | lioux | 2002-12-19 | 2 | -2/+2 |
| | | | | Submitted by: Matt Mills <alpha@vanity.com> | ||||
* | o Update to 20021105 snapshot | lioux | 2002-12-19 | 2 | -4/+9 |
| | | | | | | | | | | o Depend on compat4x on OSVERSION >= 500000 since these are 4.5-RELEASE binaries o House a copy under MASTER_SITE_LOCAL: the local copy will be versioned, developer has yet to be convinced of the advantages of distributing versioned files Approved by: portmgr (knu) | ||||
* | Mark BROKEN due to "Unknown problem" | lioux | 2002-11-25 | 1 | -0/+2 |
| | | | | Submitted by: maintainer | ||||
* | unbroke by upgrade to 20021018 | ijliao | 2002-11-20 | 8 | -30/+72 |
| | | | | | | | drop maintainership PR: 45466 Submitted by: old maintainer | ||||
* | add treepuzzle 5.1 | ijliao | 2002-11-20 | 6 | -0/+41 |
| | | | | | | | Maximum likelihood phylogeny reconstruction using quartets PR: 45241 Submitted by: Jan Lentfer <lentferj@neslonek.bio.tu-darmstadt.de> | ||||
* | 1. add a missing dependency on png and unbreak. | maho | 2002-11-19 | 1 | -2/+3 |
| | | | | 2. change e-mail address of maho. | ||||
* | o Rollback PORTCOMMENT modifications while this feature's implementation | lioux | 2002-11-10 | 6 | -6/+3 |
| | | | | | | | | is better studied o Turn PORTCOMMENT variable in Makefile back into pkg-comment files Approved by: kris (portmgr hat), portmgr, re (silence) | ||||
* | Update WWW | arved | 2002-11-07 | 1 | -1/+1 |
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* | Updated to fix problems as stated in PR ports/42915 | edwin | 2002-11-07 | 3 | -2/+42 |
| | | | | | PR: ports/42915 Submitted by: Tony Maher <tonym@biolateral.com.au> | ||||
* | Fix PORTCOMMENTs that were killing INDEX builds. | adamw | 2002-11-07 | 2 | -2/+1 |
| | | | | | 105 pointy hats to: me Approved by: pat | ||||
* | Use PORTCOMMENT in the Makefile, and whack the pkg-comment. | adamw | 2002-11-06 | 8 | -4/+8 |
| | | | | Approved by: pat | ||||
* | Modify replace RE to match syntax of sed now ("\)" -> ")" | edwin | 2002-11-05 | 1 | -8/+8 |
| | | | | Noticed by: bento | ||||
* | PERL -> REINPLACE | edwin | 2002-11-04 | 4 | -10/+15 |
| | | | | And some ports have USE_PERL5=yes now. | ||||
* | PERL -> REINPLACE | edwin | 2002-11-04 | 1 | -1/+2 |
| | | | | Noticed on: bento | ||||
* | PERL -> REINPLACE | edwin | 2002-11-04 | 2 | -2/+4 |
| | | | | Noticed on: bento | ||||
* | Port needs perl to build. | edwin | 2002-11-04 | 1 | -0/+2 |
| | | | | Seen on: bento | ||||
* | Make biology/avida building on -current again | edwin | 2002-11-03 | 2 | -3/+2 |
| | | | | | | PR: ports/44819 Submitted by: Oliver Lehmann <lehmann@ans-netz.de> Approved by: Jeremy Karlson <karlj000@unbc.ca> | ||||
* | Add another entry for MASTER_SITES and unbreak with latest version of bison | pat | 2002-10-29 | 3 | -1/+25 |
| | | | | | PR: ports/44711 Submitted by: maintainer | ||||
* | Update CATEGORIES as per ports/44331. | tom | 2002-10-21 | 1 | -2/+2 |
| | | | | | | | While I'm here, remove unnecessary whitespace spotted by portlint. PR: ports/44331 Submitted by: Martin Klaffenboeck <martin.klaffenboeck@gmx.at> | ||||
* | o Update to snapshot 20021015 | lioux | 2002-10-19 | 2 | -4/+17 |
| | | | | o Fix an issue with the startup scripts | ||||
* | Fix dependency on wxgtk | kris | 2002-10-19 | 1 | -1/+1 |
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* | CC, CXX, CFLAGS, PTHREAD_CFLAGS and PTHREAD_LIBS may contain `/' in | knu | 2002-10-10 | 1 | -1/+1 |
| | | | | | them when using a non-default compiler/linker, so do not use `/' as delimiter for s///. (I picked `|' instead) | ||||
* | Connect distribfold to build after moving it from misc category | lioux | 2002-10-07 | 1 | -0/+1 |
| | | | | | | | Prompted by: kris, Adam Weinberger <adam@vectors.cx>, Fernan Aguero <fernan@iib.unsam.edu.ar>, others | ||||
* | o New port distribfold version 0.1: distribfold.org distributed protein | lioux | 2002-10-07 | 11 | -0/+374 |
| | | | | | | folding project o One can start multiple instances of this port. Just install it using WITH_NCPU | ||||
* | Use RUBY_MOD*. | knu | 2002-10-06 | 2 | -31/+31 |
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* | - Unbreak fetching of distfiles. (Needs update as soon as freeze is over.) | wjv | 2002-09-27 | 2 | -9/+7 |
| | | | | | Submitted by: kris, bento Approved by: Implicitly by first rule of ports freeze, I hope! | ||||
* | add forgotten "USE_REINPLACE=yes" | ijliao | 2002-09-21 | 1 | -0/+1 |
| | | | | Submitted by: maintainer | ||||
* | upgrade to 20020426 | ijliao | 2002-09-21 | 6 | -22/+16 |
| | | | | | PR: 39357 Submitted by: maintainer | ||||
* | BROKEN: Does not fetch | kris | 2002-09-20 | 1 | -0/+2 |
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* | BROKEN: Does not build | kris | 2002-09-19 | 1 | -0/+2 |
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* | add primer3 0.9 | ijliao | 2002-09-17 | 6 | -0/+437 |
| | | | | | | | Primer3 helps to choose primers for PCR reactions PR: 35298 Submitted by: Tony Maher <tonym@biolateral.com.au> | ||||
* | Flip is used to find/translate orfs. | dinoex | 2002-09-10 | 6 | -0/+33 |
| | | | | | | WWW: ftp://megasun.bch.umontreal.ca/pub/flip/ PR: 35332 Submitted by: tonym@biolateral.com.au | ||||
* | "Wise2 is package that is focused on comparing DNA sequences at | dinoex | 2002-09-10 | 7 | -0/+185 |
| | | | | | the level of its conceptual translation, regardless of sequencing error and introns." | ||||
* | Chase new name of wxgtk shared library. | sobomax | 2002-09-09 | 1 | -1/+1 |
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* | Remove USE_NEWGCC, which is no longer supported or required. | kris | 2002-08-31 | 1 | -1/+0 |
| | | | | | Submitted by: Tilman Linneweh <tilman@arved.de> PR: ports/40571 | ||||
* | Deploy USE_GNOMENG infrastructure | lioux | 2002-08-30 | 2 | -2/+4 |
| | | | | | PR: 42187 Submitted by: Edwin Groothuis <edwin@mavetju.org> | ||||
* | o Fix examples directory path which is changed in last revision. | perky | 2002-08-26 | 1 | -1/+5 |
| | | | | Submitted by: Glenn Johnson <glennpj@charter.net> | ||||
* | o Fix RUN_DEPENDS path (PMW -> Pmw) | perky | 2002-08-25 | 2 | -4/+33 |
| | | | | | | | | | o Fix DISTNAME which was broken by previous commit. o Install example files PR: 41977 Submitted by: Glenn Johnson <glennpj@charter.net> Approved by: maintainer | ||||
* | Prefer <limits.h> over <values.h> as the latter has been removed from | kris | 2002-08-23 | 4 | -0/+44 |
| | | | | | | -current. Noticed by: bento |