summaryrefslogtreecommitdiffstats
path: root/biology
Commit message (Collapse)AuthorAgeFilesLines
* This port is scheduled to be removed on 2005-02-18 if it is stillkris2004-12-182-0/+4
| | | | broken at that time, and a fix has not been submitted to GNATS.
* Update to version 2.0.8krion2004-12-183-10/+19
| | | | | PR: ports/75106 Submitted by: Ports Fury
* - Update to 2004.12.16sem2004-12-182-3/+3
| | | | | PR: ports/75205 Submitted by: maintainer
* Clean up wording of IGNORE output.linimon2004-12-171-1/+1
|
* Unquote the IGNORE string.linimon2004-12-171-1/+1
|
* With portmgr hat on, switch from BROKEN to ignore. It does indeed build.linimon2004-12-171-1/+1
|
* - Fix OPTIONS handlingpav2004-12-111-3/+1
| | | | Pointy hat to: sem
* Not a real update with the last patch.sem2004-12-112-4/+5
| | | | The real update here.
* - This update brings seaview to the latest release (dated 09.24.04sem2004-12-111-1/+1
| | | | | | | | | | | in the FTP site). - While here add a modeline for vi, and fix a tab (cosmetic) - Make portlint happy. PR: ports/74897 Submitted by: maintainer
* - Add some sites I found with Google, as old master site don't have thispav2004-12-091-1/+4
| | | | | | version anymore Reported by: pointyhat via krion
* BROKEN: Broken distinfo filekris2004-12-041-0/+2
|
* Fix build on Python 2.4perky2004-12-021-0/+14
| | | | Spotted by: kris
* Update MASTER_SITES and WWW: linekrion2004-11-262-2/+2
| | | | | PR: ports/74421 Submitted by: Ports Fury
* [new port] biology/embassysem2004-11-265-0/+271
| | | | | PR: ports/74330 Submitted by: Fernan Aguero <fernan(at)iib.unsam.edu.ar>
* - Update to 2.9.0sem2004-11-269-1812/+1632
| | | | | | | - Pass maintainership to submitter PR: ports/74333 Submitted by: Fernan Aguero <fernan(at)iib.unsam.edu.ar>
* Add missing fileskris2004-11-261-0/+11
|
* - Update to 2.03sem2004-11-257-384/+175
| | | | | | | - Pass maintainership to submitter PR: ports/74332 Submitted by: Fernan Aguero <fernan(at)iib.unsam.edu.ar>
* - Remove a junk white space.sem2004-11-251-1/+1
|
* - Update to 2.3.2sem2004-11-255-69/+38
| | | | | | | | - Add WITH_PVM knob - Pass maintainership to submitter PR: ports/74331 Submitted by: Fernan Aguero <fernan(at)iib.unsam.edu.ar>
* Minor cleanup.linimon2004-11-231-2/+2
| | | | | PR: ports/72094 Submitted by: M. L. Dodson <bdodson at scms dot utmb dot edu> (maintainer)
* - Update biology/biojava to 1.30vs2004-11-223-613/+255
| | | | | | | | | - Install javadoc and example files - Assign maintainership to submitter PR: ports/73391 Submitted by: Cheng-Dae Choe Add. reviewing: hq@
* With portmgr hat on, reset inactive maintainer. These ports are now uplinimon2004-11-208-8/+8
| | | | for adoption.
* With portmgr hat on, reset inactive maintainer.linimon2004-11-201-1/+1
|
* - Distfiles change every few days, so drop md5 checking on thempav2004-11-182-4/+5
| | | | Submitted by: Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)
* Add blast, a powerful software package for gene and protein identification,pav2004-11-116-0/+324
| | | | | | | | using sensitive, selective and rapid similarity searches of protein and nucleotide sequence databases. PR: ports/69636 Submitted by: Fernan Aguero <fernan@iib.unsam.edu.ar>
* Bump PORTREVISIONS for all ports that depend on atk or pango to ease in themarcus2004-11-074-4/+4
| | | | big upgrade.
* - Fix build on amd64 (crude hack to pass -fPIC to c++ compiles)pav2004-11-061-0/+11
| | | | | Reported by: pointyhat via kris Tested on: arved's box
* Update to 3.14kevlo2004-11-063-5/+4
| | | | | PR: ports/72422 Submitted by: Choe, Cheng-Dae <whitekid@gmail.com>
* Correct a typo: s/linux-opera/linux-openmotif/g.mezz2004-11-011-1/+1
|
* - Update to 2004.06.16pav2004-11-014-167/+276
| | | | | Inspired by: ports/72726 Approved by: maintainer timeout (2 weeks)
* Chase the linux-openmotif shared library version and mark biology/spdbv asmezz2004-11-011-1/+4
| | | | | | | | broke, I get no respone from the maintainer since Oct 22, 2004. The www/linux-opera works fine with new linux-openmotif. Also, bump PORTREVISION. To fix or update for biology/spdbv is welcome, I shall commit them if I get patch(es) in my Inbox.
* Now installs on FreeBSD 5.x.kris2004-10-281-7/+1
|
* - Update to 1.30pav2004-10-273-128/+209
| | | | | | PR: ports/71400 Submitted by: Stefan Walter <sw@gegenunendlich.de> Approved by: maintainer timeout (2 months)
* Avoid the use of != statements in ports Makefilemaho2004-10-241-1/+5
| | | | | PR: 71095 Submitted by: eik
* - Update to 3.62pav2004-10-113-6/+16
| | | | | | | | - Install font files PR: ports/72212 Submitted by: Fernan Aguero <fernan@iib.unsam.edu.ar> Approved by: David A. Bader <dbader@ece.unm.edu> (maintainer)
* BROKEN on 5.x: Does not compilekris2004-09-291-1/+7
| | | | Approved by: portmgr (self)
* Upgrade to latest revision to make fetchable again.thierry2004-09-252-3/+3
| | | | Approved by: portmgr (marcus)
* Update config.h and unbreak.thierry2004-09-241-2/+2
| | | | | | PR: ports/71505 Submitted by: maintainer Approved by: portmgr (marcus).
* The build should be fixed now, so remove BROKEN mark.danfe2004-09-231-7/+1
| | | | Approved by: portmgr (marcus), fjoe (mentor, implicit)
* BROKEN on 5.x: Does not compilekris2004-09-191-1/+7
| | | | Approved by: portmgr (self)
* BROKEN on 5.x: Does not installkris2004-09-191-0/+4
| | | | Approved by: portmgr (self)
* BROKEN on 5.x: Does not installkris2004-09-181-0/+4
| | | | Approved by: portmgr (self)
* Unbreak the build on 5.X and -CURRENT.danfe2004-09-181-0/+44
| | | | | Reported by: pointyhat.freebsd.org Approved by: portmgr (marcus), fjoe (mentor, implicit)
* BROKEN on 5.x: Does not compilekris2004-09-171-1/+7
| | | | Approved by: portmgr (self)
* - add missing MAN1 and MAN3leeym2004-09-032-357/+537
| | | | | | | | | - apply DATADIR, EXAMPLESDIR, and DOCSDIR in PLIST - update the usage of NOPORTDOCS PR: 71322 Submitted by: leeym Approved by: Fernan Aguero <fernan@iib.unsam.edu.ar>
* - Unbreak by upgrading to 4.2;thierry2004-08-194-444/+387
| | | | | | | | - Use DIST_SUBDIR because tarball is not versioned; - Add sysdate to PORTVERSION to handle minor revisions; - Do some cleaning.
* biology/lsysexp is not brokenedwin2004-08-181-3/+5
| | | | | | | fix gtk build error PR: ports/70598 Submitted by: David Yeske <dyeske@yahoo.com>
* This is now buildable on 5.x, remove BROKEN.kris2004-08-171-7/+1
|
* After devel/p5-File-Temp has gained an IGNORE for PERL_LEVEL > 500800, allmat2004-08-121-1/+3
| | | | | these ports were broken because they always depended on it. I've rearranged all the dependencies to fit the new scheme.
* - Update to 5.2pav2004-07-302-3/+13
| | | | | PR: ports/69799 Submitted by: Jan Lentfer <Jan.Lentfer@web.de> (maintainer)
OpenPOWER on IntegriCloud